Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf31Q8CCF0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf31Q8CCF0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf31Q8CCF0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Gm25287-201ENSMUST00000103846 110 ntBASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Gm22918-201ENSMUST00000103855 110 ntBASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Gm25948-201ENSMUST00000175334 112 ntBASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf31Q8CCF0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Sybu-209ENSMUST00000228639 4113 ntBASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Gm38225-201ENSMUST00000194001 393 ntBASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf31Q8CCF0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Gm24158-201ENSMUST00000175263 71 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms