Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Shisa4Q8CA71 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shisa4Q8CA71 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shisa4Q8CA71 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shisa4Q8CA71 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.13■□□□□ 0.33
Shisa4Q8CA71 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa4Q8CA71 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gm23547-201ENSMUST00000158210 271 ntBASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gm18766-201ENSMUST00000189811 808 ntBASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Gm5779-201ENSMUST00000218467 910 ntBASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa4Q8CA71 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms