Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc60Q8C4J0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc60Q8C4J0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Gm45612-201ENSMUST00000211320 160 ntBASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc60Q8C4J0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Gm13464-201ENSMUST00000119418 935 ntBASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Gm2213-201ENSMUST00000197485 688 ntBASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc60Q8C4J0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms