Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm9727-201ENSMUST00000161387 555 ntBASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.28■□□□□ 0.04
Trub1Q8C0D0 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trub1Q8C0D0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Gm13464-201ENSMUST00000119418 935 ntBASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Gm23547-201ENSMUST00000158210 271 ntBASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Gm45747-201ENSMUST00000212203 999 ntBASIC15.27■□□□□ 0.04
Trub1Q8C0D0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trub1Q8C0D0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Gm27301-201ENSMUST00000184012 127 ntBASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trub1Q8C0D0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Gm9385-201ENSMUST00000117563 472 ntBASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Gm9726-201ENSMUST00000180321 678 ntBASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.25■□□□□ 0.03
Trub1Q8C0D0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms