Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Gm45212-201ENSMUST00000205831 3403 ntBASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Sh3rf2Q8BZT2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Gm28630-201ENSMUST00000187806 498 ntBASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Gm6888-201ENSMUST00000221983 706 ntBASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf2Q8BZT2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sh3rf2Q8BZT2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf2Q8BZT2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf2Q8BZT2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf2Q8BZT2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf2Q8BZT2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf2Q8BZT2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sh3rf2Q8BZT2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms