Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trerf1Q8BXJ2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Gm27525-201ENSMUST00000184465 107 ntBASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Gm5364-201ENSMUST00000216789 889 ntBASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Psmb5-202ENSMUST00000227257 622 ntBASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.65■□□□□ 0.1
Trerf1Q8BXJ2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Gm8318-201ENSMUST00000182954 872 ntBASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Gm27628-201ENSMUST00000184911 107 ntBASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Gm45167-201ENSMUST00000208007 322 ntBASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Asic1-205ENSMUST00000228185 1818 ntBASIC15.64■□□□□ 0.09
Trerf1Q8BXJ2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trerf1Q8BXJ2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trerf1Q8BXJ2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trerf1Q8BXJ2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms