Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm27430-201ENSMUST00000184585 107 ntBASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm44333-201ENSMUST00000197168 107 ntBASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm22175-201ENSMUST00000175007 78 ntBASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdk5rap1Q8BTW8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 AA543401-201ENSMUST00000164248 1269 ntBASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk5rap1Q8BTW8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap1Q8BTW8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms