Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rd3Q8BRE0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rd3Q8BRE0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Gm28630-201ENSMUST00000187806 498 ntBASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Gm2423-201ENSMUST00000074863 733 ntBASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rd3Q8BRE0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rd3Q8BRE0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gm23547-201ENSMUST00000158210 271 ntBASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gm25144-201ENSMUST00000179561 110 ntBASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gm25352-201ENSMUST00000179815 110 ntBASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.68■□□□□ 0.1
Rd3Q8BRE0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Mir7684-201ENSMUST00000183858 60 ntBASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rd3Q8BRE0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms