Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc1Q8BR37 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Gm9385-201ENSMUST00000117563 472 ntBASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 AA543401-201ENSMUST00000164248 1269 ntBASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc1Q8BR37 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.52□□□□□ -0.56
Nhlrc1Q8BR37 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc1Q8BR37 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc1Q8BR37 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc1Q8BR37 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc1Q8BR37 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc1Q8BR37 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Gm11543-201ENSMUST00000120758 370 ntBASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Gm10253-201ENSMUST00000194270 940 ntBASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc1Q8BR37 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc1Q8BR37 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc1Q8BR37 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc1Q8BR37 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc1Q8BR37 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms