Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Gm11025-201ENSMUST00000140773 466 ntBASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Chchd1-203ENSMUST00000224633 557 ntBASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip4Q8BQP8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip4Q8BQP8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Celf4-206ENSMUST00000224553 1729 ntBASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.42■□□□□ 0.22
Rab11fip4Q8BQP8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip4Q8BQP8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms