Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gm2213-201ENSMUST00000197485 688 ntBASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gm45747-201ENSMUST00000212203 999 ntBASIC15.09■□□□□ 0.01
Sfr1Q8BP27 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gm10175-201ENSMUST00000086013 645 ntBASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sfr1Q8BP27 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sfr1Q8BP27 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sfr1Q8BP27 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Sfr1Q8BP27 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sfr1Q8BP27 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sfr1Q8BP27 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sfr1Q8BP27 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.08■□□□□ 0
Sfr1Q8BP27 Gm11594-201ENSMUST00000122313 162 ntBASIC15.08■□□□□ 0
Sfr1Q8BP27 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.08■□□□□ 0
Sfr1Q8BP27 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.08■□□□□ 0
Sfr1Q8BP27 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.08■□□□□ 0
Sfr1Q8BP27 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sfr1Q8BP27 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.08■□□□□ 0
Sfr1Q8BP27 Gm10154-201ENSMUST00000084445 354 ntBASIC15.08■□□□□ 0
Sfr1Q8BP27 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.08■□□□□ 0
Sfr1Q8BP27 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sfr1Q8BP27 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.08■□□□□ 0
Sfr1Q8BP27 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sfr1Q8BP27 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Sfr1Q8BP27 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Gm16198-201ENSMUST00000118766 670 ntBASIC15.07■□□□□ 0
Sfr1Q8BP27 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sfr1Q8BP27 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.07■□□□□ 0
Sfr1Q8BP27 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.07■□□□□ 0
Sfr1Q8BP27 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sfr1Q8BP27 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms