Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 AC155729.1-201ENSMUST00000227758 544 ntBASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 AC154806.6-201ENSMUST00000228192 202 ntBASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Gm6244-201ENSMUST00000178732 841 ntBASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Gm8463-201ENSMUST00000208573 613 ntBASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Col16a1Q8BLX7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC19.14■□□□□ 0.66
Col16a1Q8BLX7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.14■□□□□ 0.66
Col16a1Q8BLX7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Mir1894-201ENSMUST00000122802 81 ntBASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Gm27839-201ENSMUST00000184242 106 ntBASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col16a1Q8BLX7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Gm12742-201ENSMUST00000117326 410 ntBASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col16a1Q8BLX7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Gm8835-201ENSMUST00000173096 1169 ntBASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 AC110817.1-201ENSMUST00000225706 605 ntBASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col16a1Q8BLX7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Gm12882-201ENSMUST00000121696 517 ntBASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Snora78-201ENSMUST00000158630 128 ntBASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Gm7446-201ENSMUST00000221035 1240 ntBASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col16a1Q8BLX7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms