Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdhr3Q8BL00 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdhr3Q8BL00 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Gm13418-201ENSMUST00000119097 944 ntBASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdhr3Q8BL00 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 143.5 ms