Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pum3Q8BKS9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pum3Q8BKS9 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pum3Q8BKS9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gm27494-201ENSMUST00000184735 189 ntBASIC15.68■□□□□ 0.1
Pum3Q8BKS9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.68■□□□□ 0.1
Pum3Q8BKS9 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pum3Q8BKS9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Gm6736-201ENSMUST00000166583 948 ntBASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Gm27702-201ENSMUST00000184512 56 ntBASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pum3Q8BKS9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms