Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubp1Q811S7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubp1Q811S7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubp1Q811S7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubp1Q811S7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubp1Q811S7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ubp1Q811S7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubp1Q811S7 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.62□□□□□ -0.07
Ubp1Q811S7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Gm4995-201ENSMUST00000117247 432 ntBASIC14.62□□□□□ -0.07
Ubp1Q811S7 Gm9385-201ENSMUST00000117563 472 ntBASIC14.62□□□□□ -0.07
Ubp1Q811S7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Gm27301-201ENSMUST00000184012 127 ntBASIC14.62□□□□□ -0.07
Ubp1Q811S7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Efs-202ENSMUST00000227037 2540 ntBASIC14.62□□□□□ -0.07
Ubp1Q811S7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubp1Q811S7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.61□□□□□ -0.07
Ubp1Q811S7 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.61□□□□□ -0.07
Ubp1Q811S7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.61□□□□□ -0.07
Ubp1Q811S7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.61□□□□□ -0.07
Ubp1Q811S7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubp1Q811S7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.6□□□□□ -0.07
Ubp1Q811S7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.6□□□□□ -0.07
Ubp1Q811S7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.6□□□□□ -0.07
Ubp1Q811S7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms