Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Asic1-205ENSMUST00000228185 1818 ntBASIC14.16□□□□□ -0.14
Vrk1Q80X41 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Gm27306-201ENSMUST00000183970 107 ntBASIC14.16□□□□□ -0.14
Vrk1Q80X41 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gm12151-201ENSMUST00000121374 290 ntBASIC14.15□□□□□ -0.14
Vrk1Q80X41 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gm27920-201ENSMUST00000183953 96 ntBASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gm18049-201ENSMUST00000208909 581 ntBASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.15□□□□□ -0.14
Vrk1Q80X41 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
Vrk1Q80X41 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vrk1Q80X41 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.15□□□□□ -0.15
Vrk1Q80X41 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Vrk1Q80X41 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Vrk1Q80X41 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.14□□□□□ -0.15
Vrk1Q80X41 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Gm27437-201ENSMUST00000183429 107 ntBASIC14.14□□□□□ -0.15
Vrk1Q80X41 Gm38294-201ENSMUST00000192831 381 ntBASIC14.14□□□□□ -0.15
Vrk1Q80X41 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.14□□□□□ -0.15
Vrk1Q80X41 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.14□□□□□ -0.15
Vrk1Q80X41 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vrk1Q80X41 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vrk1Q80X41 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms