Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Gm7488-201ENSMUST00000117148 684 ntBASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Gm13453-201ENSMUST00000118708 357 ntBASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Gm9794-201ENSMUST00000202370 423 ntBASIC17.1■□□□□ 0.33
Prpf40bQ80W14 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.1■□□□□ 0.33
Prpf40bQ80W14 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf40bQ80W14 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf40bQ80W14 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf40bQ80W14 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf40bQ80W14 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf40bQ80W14 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf40bQ80W14 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf40bQ80W14 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.08■□□□□ 0.33
Prpf40bQ80W14 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Syt7-205ENSMUST00000224135 1557 ntBASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gm43433-201ENSMUST00000196573 481 ntBASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gm6888-201ENSMUST00000221983 706 ntBASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf40bQ80W14 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf40bQ80W14 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms