Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Mir7684-201ENSMUST00000183858 60 ntBASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Gm38225-201ENSMUST00000194001 393 ntBASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc2Q80VA5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Sh3tc2Q80VA5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc2Q80VA5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc2Q80VA5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Gm14722-201ENSMUST00000118943 689 ntBASIC16.12■□□□□ 0.17
Sh3tc2Q80VA5 Gm15483-201ENSMUST00000120338 456 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms