Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim62Q80V85 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim62Q80V85 Gm9726-201ENSMUST00000180321 678 ntBASIC15.32■□□□□ 0.04
Trim62Q80V85 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.32■□□□□ 0.04
Trim62Q80V85 Gm9182-201ENSMUST00000217829 639 ntBASIC15.32■□□□□ 0.04
Trim62Q80V85 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim62Q80V85 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.32■□□□□ 0.04
Trim62Q80V85 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim62Q80V85 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.32■□□□□ 0.04
Trim62Q80V85 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim62Q80V85 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim62Q80V85 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim62Q80V85 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim62Q80V85 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim62Q80V85 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim62Q80V85 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim62Q80V85 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim62Q80V85 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim62Q80V85 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.31■□□□□ 0.04
Trim62Q80V85 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.3■□□□□ 0.04
Trim62Q80V85 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.3■□□□□ 0.04
Trim62Q80V85 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim62Q80V85 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim62Q80V85 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.29■□□□□ 0.04
Trim62Q80V85 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.29■□□□□ 0.04
Trim62Q80V85 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm2810-201ENSMUST00000118681 990 ntBASIC15.29■□□□□ 0.04
Trim62Q80V85 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm18889-201ENSMUST00000174284 929 ntBASIC15.29■□□□□ 0.04
Trim62Q80V85 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm27920-201ENSMUST00000183953 96 ntBASIC15.29■□□□□ 0.04
Trim62Q80V85 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms