Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Gm5479-201ENSMUST00000160578 435 ntBASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Asic1-205ENSMUST00000228185 1818 ntBASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubfd1Q78JW9 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Gm6415-201ENSMUST00000118488 348 ntBASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ubfd1Q78JW9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms