Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Sned1Q70E20 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Sned1Q70E20 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.58■□□□□ 0.41
Sned1Q70E20 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.58■□□□□ 0.41
Sned1Q70E20 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.58■□□□□ 0.41
Sned1Q70E20 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Gm40466-201ENSMUST00000212174 422 ntBASIC17.58■□□□□ 0.41
Sned1Q70E20 Gm8598-201ENSMUST00000221184 836 ntBASIC17.58■□□□□ 0.41
Sned1Q70E20 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sned1Q70E20 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Sned1Q70E20 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.58■□□□□ 0.4
Sned1Q70E20 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sned1Q70E20 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sned1Q70E20 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.57■□□□□ 0.4
Sned1Q70E20 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.57■□□□□ 0.4
Sned1Q70E20 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.57■□□□□ 0.4
Sned1Q70E20 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.57■□□□□ 0.4
Sned1Q70E20 Gm27243-201ENSMUST00000183964 521 ntBASIC17.57■□□□□ 0.4
Sned1Q70E20 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sned1Q70E20 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sned1Q70E20 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sned1Q70E20 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sned1Q70E20 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.57■□□□□ 0.4
Sned1Q70E20 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sned1Q70E20 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Sned1Q70E20 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.56■□□□□ 0.4
Sned1Q70E20 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sned1Q70E20 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sned1Q70E20 Gm18056-201ENSMUST00000207670 568 ntBASIC17.56■□□□□ 0.4
Sned1Q70E20 Gm18061-201ENSMUST00000208350 562 ntBASIC17.56■□□□□ 0.4
Sned1Q70E20 Gm18063-201ENSMUST00000208529 568 ntBASIC17.56■□□□□ 0.4
Sned1Q70E20 Gm18052-201ENSMUST00000208750 559 ntBASIC17.56■□□□□ 0.4
Sned1Q70E20 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.56■□□□□ 0.4
Sned1Q70E20 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sned1Q70E20 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sned1Q70E20 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Sned1Q70E20 Gm12384-201ENSMUST00000119228 919 ntBASIC17.55■□□□□ 0.4
Sned1Q70E20 Gm11803-201ENSMUST00000119966 444 ntBASIC17.55■□□□□ 0.4
Sned1Q70E20 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Gm7584-201ENSMUST00000175829 940 ntBASIC17.55■□□□□ 0.4
Sned1Q70E20 Gm6983-201ENSMUST00000214912 628 ntBASIC17.55■□□□□ 0.4
Sned1Q70E20 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.55■□□□□ 0.4
Sned1Q70E20 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.55■□□□□ 0.4
Sned1Q70E20 App-207ENSMUST00000227737 2827 ntBASIC17.55■□□□□ 0.4
Sned1Q70E20 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms