Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nudcd1Q6PIP5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nudcd1Q6PIP5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nudcd1Q6PIP5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nudcd1Q6PIP5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nudcd1Q6PIP5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nudcd1Q6PIP5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nudcd1Q6PIP5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 AA543401-201ENSMUST00000164248 1269 ntBASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Gm24158-201ENSMUST00000175263 71 ntBASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Gm25948-201ENSMUST00000175334 112 ntBASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nudcd1Q6PIP5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd1Q6PIP5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd1Q6PIP5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd1Q6PIP5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms