Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Gm23547-201ENSMUST00000158210 271 ntBASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Gm44492-201ENSMUST00000197012 141 ntBASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcc2Q6PDG5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc2Q6PDG5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Gm24513-201ENSMUST00000174964 138 ntBASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Gm27702-201ENSMUST00000184512 56 ntBASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Gm27397-201ENSMUST00000184997 107 ntBASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Gm17968-201ENSMUST00000194902 784 ntBASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc2Q6PDG5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Gm12008-201ENSMUST00000117791 755 ntBASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Gm14822-201ENSMUST00000122247 291 ntBASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Gm25911-201ENSMUST00000157621 56 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms