Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.7□□□□□ -0.22
VcanQ62059 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 B9d1os-201ENSMUST00000137010 674 ntBASIC13.7□□□□□ -0.22
VcanQ62059 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.7□□□□□ -0.22
VcanQ62059 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Gm24196-201ENSMUST00000179161 110 ntBASIC13.69□□□□□ -0.22
VcanQ62059 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
VcanQ62059 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VcanQ62059 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.69□□□□□ -0.22
VcanQ62059 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.69□□□□□ -0.22
VcanQ62059 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.69□□□□□ -0.22
VcanQ62059 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
VcanQ62059 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
VcanQ62059 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
VcanQ62059 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.69□□□□□ -0.22
VcanQ62059 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.69□□□□□ -0.22
VcanQ62059 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Gm8652-201ENSMUST00000181363 964 ntBASIC13.69□□□□□ -0.22
VcanQ62059 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
VcanQ62059 Gm43947-201ENSMUST00000203019 959 ntBASIC13.69□□□□□ -0.22
VcanQ62059 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.69□□□□□ -0.22
VcanQ62059 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.69□□□□□ -0.22
VcanQ62059 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.69□□□□□ -0.22
VcanQ62059 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VcanQ62059 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
VcanQ62059 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.68□□□□□ -0.22
VcanQ62059 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
VcanQ62059 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.68□□□□□ -0.22
VcanQ62059 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.68□□□□□ -0.22
VcanQ62059 Gm40466-201ENSMUST00000212174 422 ntBASIC13.68□□□□□ -0.22
VcanQ62059 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.68□□□□□ -0.22
VcanQ62059 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.68□□□□□ -0.22
VcanQ62059 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.68□□□□□ -0.22
VcanQ62059 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VcanQ62059 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.68□□□□□ -0.22
VcanQ62059 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.68□□□□□ -0.22
VcanQ62059 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.67□□□□□ -0.22
VcanQ62059 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
VcanQ62059 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VcanQ62059 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.67□□□□□ -0.22
VcanQ62059 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VcanQ62059 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.67□□□□□ -0.22
VcanQ62059 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.67□□□□□ -0.22
VcanQ62059 Gm43138-201ENSMUST00000199123 708 ntBASIC13.67□□□□□ -0.22
VcanQ62059 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.67□□□□□ -0.22
VcanQ62059 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.67□□□□□ -0.22
VcanQ62059 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.67□□□□□ -0.22
VcanQ62059 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms