Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Ctr9Q62018 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ctr9Q62018 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ctr9Q62018 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ctr9Q62018 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ctr9Q62018 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ctr9Q62018 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm22065-201ENSMUST00000103753 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm22066-201ENSMUST00000103761 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24932-201ENSMUST00000103763 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24115-201ENSMUST00000103799 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm22190-201ENSMUST00000103827 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm22191-201ENSMUST00000103831 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24721-201ENSMUST00000103849 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm28018-201ENSMUST00000103869 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm26399-201ENSMUST00000103937 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ctr9Q62018 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm25349-201ENSMUST00000177728 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm23616-201ENSMUST00000177797 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm25871-201ENSMUST00000177816 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24752-201ENSMUST00000178240 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24496-201ENSMUST00000178287 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm25649-201ENSMUST00000178476 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm25548-201ENSMUST00000178681 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm23147-201ENSMUST00000178841 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm26095-201ENSMUST00000179270 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm22171-201ENSMUST00000179283 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm23936-201ENSMUST00000179354 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm22619-201ENSMUST00000179516 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm25255-201ENSMUST00000179579 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24755-201ENSMUST00000179691 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm26506-201ENSMUST00000179692 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm25086-201ENSMUST00000179931 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm23243-201ENSMUST00000180047 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24659-201ENSMUST00000180212 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm24169-201ENSMUST00000180244 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm23689-201ENSMUST00000180354 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm27920-201ENSMUST00000183953 96 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm27359-201ENSMUST00000184153 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm27785-201ENSMUST00000184268 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm27466-201ENSMUST00000184396 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Gm27703-201ENSMUST00000184836 110 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.45■□□□□ 0.38
Ctr9Q62018 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.45■□□□□ 0.38
Ctr9Q62018 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ctr9Q62018 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctr9Q62018 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Ctr9Q62018 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.44■□□□□ 0.38
Ctr9Q62018 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.44■□□□□ 0.38
Ctr9Q62018 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Gm25287-201ENSMUST00000103846 110 ntBASIC17.44■□□□□ 0.38
Ctr9Q62018 Gm22918-201ENSMUST00000103855 110 ntBASIC17.44■□□□□ 0.38
Ctr9Q62018 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Gm13616-201ENSMUST00000120600 222 ntBASIC17.44■□□□□ 0.38
Ctr9Q62018 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.44■□□□□ 0.38
Ctr9Q62018 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctr9Q62018 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.44■□□□□ 0.38
Ctr9Q62018 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms