Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.14□□□□□ -0.15
Rai1Q61818 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rai1Q61818 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rai1Q61818 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rai1Q61818 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rai1Q61818 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rai1Q61818 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rai1Q61818 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 Gm8602-201ENSMUST00000184045 607 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.13□□□□□ -0.15
Rai1Q61818 Gm18062-201ENSMUST00000208020 547 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 Gm18055-201ENSMUST00000208254 547 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.13□□□□□ -0.15
Rai1Q61818 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rai1Q61818 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.13□□□□□ -0.15
Rai1Q61818 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rai1Q61818 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.13□□□□□ -0.15
Rai1Q61818 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rai1Q61818 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rai1Q61818 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.13□□□□□ -0.15
Rai1Q61818 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Rai1Q61818 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rai1Q61818 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rai1Q61818 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.12□□□□□ -0.15
Rai1Q61818 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.12□□□□□ -0.15
Rai1Q61818 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.12□□□□□ -0.15
Rai1Q61818 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rai1Q61818 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rai1Q61818 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.12□□□□□ -0.15
Rai1Q61818 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.12□□□□□ -0.15
Rai1Q61818 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.12□□□□□ -0.15
Rai1Q61818 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.12□□□□□ -0.15
Rai1Q61818 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.12□□□□□ -0.15
Rai1Q61818 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.12□□□□□ -0.15
Rai1Q61818 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rai1Q61818 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.11□□□□□ -0.15
Rai1Q61818 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rai1Q61818 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rai1Q61818 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.11□□□□□ -0.15
Rai1Q61818 Gm19220-201ENSMUST00000222682 803 ntBASIC14.11□□□□□ -0.15
Rai1Q61818 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.11□□□□□ -0.15
Rai1Q61818 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rai1Q61818 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rai1Q61818 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms