Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ecm1Q61508 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ecm1Q61508 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ecm1Q61508 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ecm1Q61508 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ecm1Q61508 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Gm12138-201ENSMUST00000122180 951 ntBASIC16.31■□□□□ 0.2
Ecm1Q61508 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Gm43433-201ENSMUST00000196573 481 ntBASIC16.31■□□□□ 0.2
Ecm1Q61508 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Gm9908-201ENSMUST00000211534 448 ntBASIC16.31■□□□□ 0.2
Ecm1Q61508 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Ecm1Q61508 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ecm1Q61508 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Gm12091-201ENSMUST00000146791 830 ntBASIC16.3■□□□□ 0.2
Ecm1Q61508 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Gm10766-202ENSMUST00000194123 606 ntBASIC16.3■□□□□ 0.2
Ecm1Q61508 Gm37917-201ENSMUST00000194711 392 ntBASIC16.3■□□□□ 0.2
Ecm1Q61508 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Gm9797-201ENSMUST00000052902 613 ntBASIC16.3■□□□□ 0.2
Ecm1Q61508 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ecm1Q61508 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ecm1Q61508 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ecm1Q61508 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 BC001981-202ENSMUST00000191393 1545 ntBASIC16.29■□□□□ 0.2
Ecm1Q61508 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.29■□□□□ 0.2
Ecm1Q61508 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Gm28760-201ENSMUST00000185995 736 ntBASIC16.29■□□□□ 0.2
Ecm1Q61508 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.29■□□□□ 0.2
Ecm1Q61508 Gm45384-201ENSMUST00000210451 277 ntBASIC16.29■□□□□ 0.2
Ecm1Q61508 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.29■□□□□ 0.2
Ecm1Q61508 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ecm1Q61508 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ecm1Q61508 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Ecm1Q61508 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ecm1Q61508 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ecm1Q61508 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ecm1Q61508 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ecm1Q61508 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ecm1Q61508 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.28■□□□□ 0.2
Ecm1Q61508 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms