Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ift88Q61371 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ift88Q61371 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.42■□□□□ 0.22
Ift88Q61371 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.42■□□□□ 0.22
Ift88Q61371 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.42■□□□□ 0.22
Ift88Q61371 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ift88Q61371 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ift88Q61371 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ift88Q61371 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
Ift88Q61371 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
Ift88Q61371 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ift88Q61371 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Gm5682-201ENSMUST00000173402 505 ntBASIC16.41■□□□□ 0.22
Ift88Q61371 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.41■□□□□ 0.22
Ift88Q61371 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.41■□□□□ 0.22
Ift88Q61371 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.41■□□□□ 0.22
Ift88Q61371 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.41■□□□□ 0.22
Ift88Q61371 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.41■□□□□ 0.22
Ift88Q61371 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.41■□□□□ 0.22
Ift88Q61371 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Ift88Q61371 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Ift88Q61371 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ift88Q61371 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ift88Q61371 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ift88Q61371 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.4■□□□□ 0.22
Ift88Q61371 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ift88Q61371 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.4■□□□□ 0.22
Ift88Q61371 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ift88Q61371 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.4■□□□□ 0.22
Ift88Q61371 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Ift88Q61371 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ift88Q61371 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ift88Q61371 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Ift88Q61371 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ift88Q61371 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ift88Q61371 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.39■□□□□ 0.21
Ift88Q61371 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ift88Q61371 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Ift88Q61371 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Ift88Q61371 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ift88Q61371 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms