Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.77■□□□□ 0.44
Mre11Q61216 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Mre11Q61216 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Mre11Q61216 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mre11Q61216 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Mre11Q61216 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mre11Q61216 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mre11Q61216 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
Mre11Q61216 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Mre11Q61216 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Mre11Q61216 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.77■□□□□ 0.43
Mre11Q61216 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Mre11Q61216 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Mre11Q61216 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Mre11Q61216 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.76■□□□□ 0.43
Mre11Q61216 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Mre11Q61216 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Mre11Q61216 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.76■□□□□ 0.43
Mre11Q61216 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mre11Q61216 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.75■□□□□ 0.43
Mre11Q61216 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Mre11Q61216 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.75■□□□□ 0.43
Mre11Q61216 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.75■□□□□ 0.43
Mre11Q61216 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.75■□□□□ 0.43
Mre11Q61216 Gm38094-201ENSMUST00000195864 2978 ntBASIC17.75■□□□□ 0.43
Mre11Q61216 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.75■□□□□ 0.43
Mre11Q61216 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Mre11Q61216 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mre11Q61216 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.74■□□□□ 0.43
Mre11Q61216 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mre11Q61216 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Mre11Q61216 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mre11Q61216 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Grk6-207ENSMUST00000225925 2769 ntBASIC17.73■□□□□ 0.43
Mre11Q61216 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mre11Q61216 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.73■□□□□ 0.43
Mre11Q61216 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.73■□□□□ 0.43
Mre11Q61216 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mre11Q61216 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
Mre11Q61216 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mre11Q61216 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms