Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm12895-201ENSMUST00000122214 226 ntBASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm28033-201ENSMUST00000184224 96 ntBASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8d-1Q5R1H8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Gm15165-201ENSMUST00000118140 502 ntBASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8d-1Q5R1H8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav8d-1Q5R1H8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms