Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srrm1Q52KI8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Mir6420-201ENSMUST00000185032 102 ntBASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Gm18018-201ENSMUST00000198273 408 ntBASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Gm44719-201ENSMUST00000206404 149 ntBASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Srrm1Q52KI8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Gm9522-201ENSMUST00000182394 926 ntBASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Gm28631-201ENSMUST00000190740 334 ntBASIC16.55■□□□□ 0.24
Srrm1Q52KI8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srrm1Q52KI8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.55■□□□□ 0.24
Srrm1Q52KI8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Gm13829-201ENSMUST00000119600 138 ntBASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.54■□□□□ 0.24
Srrm1Q52KI8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms