Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cracr2aQ3UP38 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Gm4995-201ENSMUST00000117247 432 ntBASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cracr2aQ3UP38 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cracr2aQ3UP38 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Gm10154-201ENSMUST00000084445 354 ntBASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cracr2aQ3UP38 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cracr2aQ3UP38 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cracr2aQ3UP38 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms