Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Gm22175-201ENSMUST00000175007 78 ntBASIC15.07■□□□□ 0
Naf1Q3UMQ8 Gm27920-201ENSMUST00000183953 96 ntBASIC15.07■□□□□ 0
Naf1Q3UMQ8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Gm5779-201ENSMUST00000218467 910 ntBASIC15.07■□□□□ 0
Naf1Q3UMQ8 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.07■□□□□ 0
Naf1Q3UMQ8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.06■□□□□ 0
Naf1Q3UMQ8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.06■□□□□ 0
Naf1Q3UMQ8 Gm11543-201ENSMUST00000120758 370 ntBASIC15.06■□□□□ 0
Naf1Q3UMQ8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Naf1Q3UMQ8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Gm24158-201ENSMUST00000175263 71 ntBASIC15.06■□□□□ 0
Naf1Q3UMQ8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.06■□□□□ 0
Naf1Q3UMQ8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Naf1Q3UMQ8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Naf1Q3UMQ8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.05■□□□□ 0
Naf1Q3UMQ8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Naf1Q3UMQ8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Naf1Q3UMQ8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Naf1Q3UMQ8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.05■□□□□ -0
Naf1Q3UMQ8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Naf1Q3UMQ8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms