Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Spg11Q3UHA3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gm8805-201ENSMUST00000117848 313 ntBASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gm15393-201ENSMUST00000120499 219 ntBASIC13.51□□□□□ -0.25
Spg11Q3UHA3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Spg11Q3UHA3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Gm9368-201ENSMUST00000219348 831 ntBASIC13.5□□□□□ -0.25
Spg11Q3UHA3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms