Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Gm7774-201ENSMUST00000200064 533 ntBASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rufy4Q3TYX8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Gm11543-201ENSMUST00000120758 370 ntBASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rufy4Q3TYX8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Gm29541-201ENSMUST00000191351 678 ntBASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.3■□□□□ 0.2
Rufy4Q3TYX8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Gm22175-201ENSMUST00000175007 78 ntBASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Gm38294-201ENSMUST00000192831 381 ntBASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rufy4Q3TYX8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms