Protein–RNA interactions for Protein: Q30KN1

Defb47, Beta-defensin 41, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb47Q30KN1 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.02□□□□□ -0.81
Defb47Q30KN1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Defb47Q30KN1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.01□□□□□ -0.81
Defb47Q30KN1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.01□□□□□ -0.81
Defb47Q30KN1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.01□□□□□ -0.81
Defb47Q30KN1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Defb47Q30KN1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Defb47Q30KN1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10□□□□□ -0.81
Defb47Q30KN1 AC099934.2-201ENSMUST00000196389 70 ntBASIC10□□□□□ -0.81
Defb47Q30KN1 AC156953.1-201ENSMUST00000196953 70 ntBASIC10□□□□□ -0.81
Defb47Q30KN1 AC157822.2-201ENSMUST00000200291 70 ntBASIC10□□□□□ -0.81
Defb47Q30KN1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10□□□□□ -0.81
Defb47Q30KN1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Defb47Q30KN1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Defb47Q30KN1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms