Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm18061-201ENSMUST00000208350 562 ntBASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Gm18063-201ENSMUST00000208529 568 ntBASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Gm18052-201ENSMUST00000208750 559 ntBASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col19a1Q0VF58 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Gm3786-201ENSMUST00000202659 378 ntBASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Gm24526-201ENSMUST00000082921 158 ntBASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col19a1Q0VF58 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 BC001981-202ENSMUST00000191393 1545 ntBASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Gm27847-201ENSMUST00000183711 107 ntBASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Gm27375-201ENSMUST00000183799 107 ntBASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Gm37230-201ENSMUST00000194491 818 ntBASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col19a1Q0VF58 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Gm5187-201ENSMUST00000117317 991 ntBASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Gm14723-201ENSMUST00000118686 215 ntBASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Gm8463-201ENSMUST00000208573 613 ntBASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Gm17795-201ENSMUST00000214505 757 ntBASIC15.64■□□□□ 0.09
Col19a1Q0VF58 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col19a1Q0VF58 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms