Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.19□□□□□ -0.14
Hoxc4Q08624 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Mir7684-201ENSMUST00000183858 60 ntBASIC14.19□□□□□ -0.14
Hoxc4Q08624 Gm38294-201ENSMUST00000192831 381 ntBASIC14.19□□□□□ -0.14
Hoxc4Q08624 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.19□□□□□ -0.14
Hoxc4Q08624 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc4Q08624 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Gm15653-201ENSMUST00000119247 907 ntBASIC14.18□□□□□ -0.14
Hoxc4Q08624 Gm6222-201ENSMUST00000120787 396 ntBASIC14.18□□□□□ -0.14
Hoxc4Q08624 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Hoxc4Q08624 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Gm27989-201ENSMUST00000184721 107 ntBASIC14.18□□□□□ -0.14
Hoxc4Q08624 Gm27321-201ENSMUST00000185021 205 ntBASIC14.18□□□□□ -0.14
Hoxc4Q08624 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Gm9063-201ENSMUST00000223299 582 ntBASIC14.18□□□□□ -0.14
Hoxc4Q08624 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc4Q08624 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm10275-202ENSMUST00000168697 495 ntBASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm27631-201ENSMUST00000184163 466 ntBASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm44344-201ENSMUST00000200287 129 ntBASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm16476-201ENSMUST00000221544 139 ntBASIC14.17□□□□□ -0.14
Hoxc4Q08624 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm10275-201ENSMUST00000092620 635 ntBASIC14.17□□□□□ -0.14
Hoxc4Q08624 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms