Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm13047-201ENSMUST00000117116 815 ntBASIC14.48□□□□□ -0.09
Col9a1Q05722 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.48□□□□□ -0.09
Col9a1Q05722 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm27320-201ENSMUST00000184892 109 ntBASIC14.48□□□□□ -0.09
Col9a1Q05722 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.48□□□□□ -0.09
Col9a1Q05722 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.48□□□□□ -0.09
Col9a1Q05722 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.48□□□□□ -0.09
Col9a1Q05722 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.48□□□□□ -0.09
Col9a1Q05722 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col9a1Q05722 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Col9a1Q05722 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Col9a1Q05722 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.47□□□□□ -0.09
Col9a1Q05722 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.47□□□□□ -0.09
Col9a1Q05722 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.47□□□□□ -0.09
Col9a1Q05722 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.47□□□□□ -0.09
Col9a1Q05722 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC14.47□□□□□ -0.09
Col9a1Q05722 Gm43058-201ENSMUST00000197645 625 ntBASIC14.47□□□□□ -0.09
Col9a1Q05722 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.47□□□□□ -0.09
Col9a1Q05722 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.47□□□□□ -0.09
Col9a1Q05722 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a1Q05722 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Gm27438-201ENSMUST00000183480 110 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Gm28975-201ENSMUST00000186412 686 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Gm38002-201ENSMUST00000193255 180 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Gm43818-201ENSMUST00000200605 466 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Cts7-204ENSMUST00000225321 1257 ntBASIC14.46□□□□□ -0.09
Col9a1Q05722 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a1Q05722 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.46□□□□□ -0.09
Col9a1Q05722 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a1Q05722 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a1Q05722 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.46□□□□□ -0.1
Col9a1Q05722 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a1Q05722 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
Col9a1Q05722 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.45□□□□□ -0.1
Col9a1Q05722 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a1Q05722 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms