Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.26■□□□□ 0.03
Trim43bP86448 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim43bP86448 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.26■□□□□ 0.03
Trim43bP86448 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim43bP86448 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim43bP86448 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim43bP86448 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim43bP86448 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim43bP86448 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trim43bP86448 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim43bP86448 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.26■□□□□ 0.03
Trim43bP86448 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trim43bP86448 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43bP86448 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trim43bP86448 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trim43bP86448 Gm11764-201ENSMUST00000120221 623 ntBASIC15.25■□□□□ 0.03
Trim43bP86448 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43bP86448 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.25■□□□□ 0.03
Trim43bP86448 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.25■□□□□ 0.03
Trim43bP86448 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43bP86448 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.25■□□□□ 0.03
Trim43bP86448 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43bP86448 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim43bP86448 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim43bP86448 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Gm15173-201ENSMUST00000122049 433 ntBASIC15.24■□□□□ 0.03
Trim43bP86448 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.24■□□□□ 0.03
Trim43bP86448 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim43bP86448 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.24■□□□□ 0.03
Trim43bP86448 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim43bP86448 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.24■□□□□ 0.03
Trim43bP86448 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trim43bP86448 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trim43bP86448 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim43bP86448 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43bP86448 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43bP86448 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Trim43bP86448 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43bP86448 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43bP86448 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
Trim43bP86448 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43bP86448 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43bP86448 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim43bP86448 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43bP86448 Carlr-201ENSMUST00000181515 2574 ntBASIC15.23■□□□□ 0.03
Trim43bP86448 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43bP86448 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms