Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.44□□□□□ -0.42
SgcaP82350 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.44□□□□□ -0.42
SgcaP82350 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm14722-201ENSMUST00000118943 689 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.44□□□□□ -0.42
SgcaP82350 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.44□□□□□ -0.42
SgcaP82350 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.44□□□□□ -0.42
SgcaP82350 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SgcaP82350 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm8825-201ENSMUST00000182565 998 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm4518-201ENSMUST00000182638 718 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.44□□□□□ -0.42
SgcaP82350 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.44□□□□□ -0.42
SgcaP82350 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.44□□□□□ -0.42
SgcaP82350 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.44□□□□□ -0.42
SgcaP82350 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SgcaP82350 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SgcaP82350 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SgcaP82350 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcaP82350 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SgcaP82350 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SgcaP82350 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SgcaP82350 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.43□□□□□ -0.42
SgcaP82350 Gm25406-201ENSMUST00000157599 105 ntBASIC12.43□□□□□ -0.42
SgcaP82350 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.43□□□□□ -0.42
SgcaP82350 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Carlr-201ENSMUST00000181515 2574 ntBASIC12.43□□□□□ -0.42
SgcaP82350 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.43□□□□□ -0.42
SgcaP82350 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.43□□□□□ -0.42
SgcaP82350 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SgcaP82350 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SgcaP82350 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcaP82350 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SgcaP82350 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SgcaP82350 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SgcaP82350 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SgcaP82350 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcaP82350 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
SgcaP82350 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms