Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Shox2P70390 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Gm8344-201ENSMUST00000119813 856 ntBASIC14.65□□□□□ -0.06
Shox2P70390 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.65□□□□□ -0.06
Shox2P70390 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.65□□□□□ -0.06
Shox2P70390 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.65□□□□□ -0.06
Shox2P70390 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Shox2P70390 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.65□□□□□ -0.06
Shox2P70390 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.65□□□□□ -0.06
Shox2P70390 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Shox2P70390 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shox2P70390 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Shox2P70390 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Shox2P70390 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Shox2P70390 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Shox2P70390 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.64□□□□□ -0.07
Shox2P70390 Gm11355-201ENSMUST00000121120 306 ntBASIC14.64□□□□□ -0.07
Shox2P70390 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.64□□□□□ -0.07
Shox2P70390 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.64□□□□□ -0.07
Shox2P70390 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.64□□□□□ -0.07
Shox2P70390 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shox2P70390 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.63□□□□□ -0.07
Shox2P70390 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Shox2P70390 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Shox2P70390 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.63□□□□□ -0.07
Shox2P70390 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.63□□□□□ -0.07
Shox2P70390 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.63□□□□□ -0.07
Shox2P70390 Mir5130-201ENSMUST00000175160 84 ntBASIC14.63□□□□□ -0.07
Shox2P70390 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.63□□□□□ -0.07
Shox2P70390 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Gm21559-201ENSMUST00000220638 855 ntBASIC14.63□□□□□ -0.07
Shox2P70390 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.63□□□□□ -0.07
Shox2P70390 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Gm8587-201ENSMUST00000076538 843 ntBASIC14.63□□□□□ -0.07
Shox2P70390 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.63□□□□□ -0.07
Shox2P70390 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shox2P70390 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.62□□□□□ -0.07
Shox2P70390 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.62□□□□□ -0.07
Shox2P70390 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Shox2P70390 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Shox2P70390 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.62□□□□□ -0.07
Shox2P70390 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Gm13436-201ENSMUST00000120418 567 ntBASIC14.62□□□□□ -0.07
Shox2P70390 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Gm27389-201ENSMUST00000183622 195 ntBASIC14.62□□□□□ -0.07
Shox2P70390 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.62□□□□□ -0.07
Shox2P70390 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Shox2P70390 Gm30025-201ENSMUST00000218555 728 ntBASIC14.62□□□□□ -0.07
Shox2P70390 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shox2P70390 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms