Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rpl39P62892 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rpl39P62892 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rpl39P62892 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rpl39P62892 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.59□□□□□ -0.71
Rpl39P62892 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rpl39P62892 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rpl39P62892 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rpl39P62892 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Rpl39P62892 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Rpl39P62892 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.58□□□□□ -0.72
Rpl39P62892 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.58□□□□□ -0.72
Rpl39P62892 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rpl39P62892 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Rpl39P62892 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.58□□□□□ -0.72
Rpl39P62892 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm9013-201ENSMUST00000132939 882 ntBASIC10.58□□□□□ -0.72
Rpl39P62892 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rpl39P62892 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.58□□□□□ -0.72
Rpl39P62892 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.58□□□□□ -0.72
Rpl39P62892 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rpl39P62892 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Rpl39P62892 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Rpl39P62892 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.58□□□□□ -0.72
Rpl39P62892 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rpl39P62892 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rpl39P62892 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rpl39P62892 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpl39P62892 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.57□□□□□ -0.72
Rpl39P62892 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpl39P62892 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Rpl39P62892 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rpl39P62892 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Gm13312-201ENSMUST00000119631 718 ntBASIC10.57□□□□□ -0.72
Rpl39P62892 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.57□□□□□ -0.72
Rpl39P62892 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Gm18032-201ENSMUST00000222541 538 ntBASIC10.57□□□□□ -0.72
Rpl39P62892 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.57□□□□□ -0.72
Rpl39P62892 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.57□□□□□ -0.72
Rpl39P62892 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Rpl39P62892 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rpl39P62892 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rpl39P62892 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.57□□□□□ -0.72
Rpl39P62892 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms