Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm12527-201ENSMUST00000117967 564 ntBASIC13.53□□□□□ -0.24
Lsm3P62311 Gm12441-201ENSMUST00000121806 588 ntBASIC13.53□□□□□ -0.24
Lsm3P62311 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm3P62311 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Lsm3P62311 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.53□□□□□ -0.24
Lsm3P62311 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lsm3P62311 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm3P62311 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm3P62311 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lsm3P62311 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.53□□□□□ -0.24
Lsm3P62311 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm3P62311 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.53□□□□□ -0.24
Lsm3P62311 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Lsm3P62311 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Lsm3P62311 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Lsm3P62311 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm3P62311 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lsm3P62311 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm3P62311 Gm13474-201ENSMUST00000122466 815 ntBASIC13.52□□□□□ -0.25
Lsm3P62311 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm3P62311 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.52□□□□□ -0.25
Lsm3P62311 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm3P62311 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.52□□□□□ -0.25
Lsm3P62311 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.52□□□□□ -0.25
Lsm3P62311 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.52□□□□□ -0.25
Lsm3P62311 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lsm3P62311 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm3P62311 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.52□□□□□ -0.25
Lsm3P62311 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.52□□□□□ -0.25
Lsm3P62311 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lsm3P62311 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm3P62311 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Lsm3P62311 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lsm3P62311 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Lsm3P62311 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Lsm3P62311 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.51□□□□□ -0.25
Lsm3P62311 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm3P62311 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm3P62311 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
Lsm3P62311 Gm8495-201ENSMUST00000188740 694 ntBASIC13.51□□□□□ -0.25
Lsm3P62311 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm3P62311 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms