Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3b6P59708 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.17□□□□□ -0.3
Sf3b6P59708 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.17□□□□□ -0.3
Sf3b6P59708 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sf3b6P59708 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sf3b6P59708 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.16□□□□□ -0.3
Sf3b6P59708 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Gm28033-201ENSMUST00000184224 96 ntBASIC13.16□□□□□ -0.3
Sf3b6P59708 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.16□□□□□ -0.3
Sf3b6P59708 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sf3b6P59708 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.16□□□□□ -0.3
Sf3b6P59708 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b6P59708 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sf3b6P59708 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3b6P59708 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.15□□□□□ -0.3
Sf3b6P59708 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sf3b6P59708 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sf3b6P59708 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3b6P59708 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3b6P59708 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3b6P59708 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3b6P59708 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.15□□□□□ -0.3
Sf3b6P59708 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b6P59708 Matn2-206ENSMUST00000228570 2798 ntBASIC13.15□□□□□ -0.31
Sf3b6P59708 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Sf3b6P59708 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sf3b6P59708 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Sf3b6P59708 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sf3b6P59708 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.14□□□□□ -0.31
Sf3b6P59708 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.14□□□□□ -0.31
Sf3b6P59708 Gm4459-201ENSMUST00000118750 468 ntBASIC13.14□□□□□ -0.31
Sf3b6P59708 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Gm25745-201ENSMUST00000174945 133 ntBASIC13.14□□□□□ -0.31
Sf3b6P59708 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.14□□□□□ -0.31
Sf3b6P59708 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.14□□□□□ -0.31
Sf3b6P59708 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.14□□□□□ -0.31
Sf3b6P59708 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms