Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nphp4P59240 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Nphp4P59240 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Nphp4P59240 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.92■□□□□ 0.78
Nphp4P59240 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.92■□□□□ 0.78
Nphp4P59240 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.92■□□□□ 0.78
Nphp4P59240 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.91■□□□□ 0.78
Nphp4P59240 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.91■□□□□ 0.78
Nphp4P59240 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC19.91■□□□□ 0.78
Nphp4P59240 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.91■□□□□ 0.78
Nphp4P59240 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nphp4P59240 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nphp4P59240 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nphp4P59240 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.91■□□□□ 0.78
Nphp4P59240 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nphp4P59240 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.9■□□□□ 0.78
Nphp4P59240 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Nphp4P59240 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.9■□□□□ 0.78
Nphp4P59240 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.9■□□□□ 0.78
Nphp4P59240 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC19.9■□□□□ 0.78
Nphp4P59240 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nphp4P59240 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nphp4P59240 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nphp4P59240 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.9■□□□□ 0.78
Nphp4P59240 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nphp4P59240 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Nphp4P59240 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nphp4P59240 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Nphp4P59240 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nphp4P59240 Gm12859-201ENSMUST00000117834 427 ntBASIC19.89■□□□□ 0.77
Nphp4P59240 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Nphp4P59240 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC19.89■□□□□ 0.77
Nphp4P59240 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC19.89■□□□□ 0.77
Nphp4P59240 Gm42612-201ENSMUST00000197986 623 ntBASIC19.89■□□□□ 0.77
Nphp4P59240 Gm43170-201ENSMUST00000199827 612 ntBASIC19.89■□□□□ 0.77
Nphp4P59240 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nphp4P59240 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nphp4P59240 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.89■□□□□ 0.77
Nphp4P59240 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nphp4P59240 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.88■□□□□ 0.77
Nphp4P59240 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 AC102291.3-201ENSMUST00000226566 405 ntBASIC19.88■□□□□ 0.77
Nphp4P59240 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nphp4P59240 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Nphp4P59240 Carlr-201ENSMUST00000181515 2574 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms