Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Gm44291-201ENSMUST00000203102 2865 ntBASIC12□□□□□ -0.49
Sssca1P56873 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sssca1P56873 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sssca1P56873 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Sssca1P56873 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Sssca1P56873 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sssca1P56873 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sssca1P56873 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sssca1P56873 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sssca1P56873 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.99□□□□□ -0.49
Sssca1P56873 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sssca1P56873 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sssca1P56873 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sssca1P56873 Gm12008-201ENSMUST00000117791 755 ntBASIC11.99□□□□□ -0.49
Sssca1P56873 Gm8097-201ENSMUST00000117903 829 ntBASIC11.99□□□□□ -0.49
Sssca1P56873 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.99□□□□□ -0.49
Sssca1P56873 Gm23547-201ENSMUST00000158210 271 ntBASIC11.99□□□□□ -0.49
Sssca1P56873 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.99□□□□□ -0.49
Sssca1P56873 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.99□□□□□ -0.49
Sssca1P56873 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.99□□□□□ -0.49
Sssca1P56873 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sssca1P56873 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.98□□□□□ -0.49
Sssca1P56873 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sssca1P56873 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sssca1P56873 Carlr-201ENSMUST00000181515 2574 ntBASIC11.98□□□□□ -0.49
Sssca1P56873 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms