Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.26□□□□□ -0.29
Abcd3P55096 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.26□□□□□ -0.29
Abcd3P55096 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.26□□□□□ -0.29
Abcd3P55096 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.26□□□□□ -0.29
Abcd3P55096 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Abcd3P55096 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.26□□□□□ -0.29
Abcd3P55096 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.26□□□□□ -0.29
Abcd3P55096 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.26□□□□□ -0.29
Abcd3P55096 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Abcd3P55096 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.26□□□□□ -0.29
Abcd3P55096 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Abcd3P55096 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Abcd3P55096 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Abcd3P55096 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Abcd3P55096 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.25□□□□□ -0.29
Abcd3P55096 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.25□□□□□ -0.29
Abcd3P55096 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
Abcd3P55096 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.25□□□□□ -0.29
Abcd3P55096 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Abcd3P55096 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Abcd3P55096 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Abcd3P55096 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Abcd3P55096 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Abcd3P55096 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Abcd3P55096 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Abcd3P55096 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Abcd3P55096 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.24□□□□□ -0.29
Abcd3P55096 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.24□□□□□ -0.29
Abcd3P55096 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Abcd3P55096 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Abcd3P55096 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.24□□□□□ -0.29
Abcd3P55096 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.24□□□□□ -0.29
Abcd3P55096 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abcd3P55096 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abcd3P55096 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Abcd3P55096 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abcd3P55096 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Abcd3P55096 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abcd3P55096 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abcd3P55096 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abcd3P55096 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Abcd3P55096 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abcd3P55096 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms