Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox3P53784 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sox3P53784 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sox3P53784 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox3P53784 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 Gm9682-201ENSMUST00000197505 556 ntBASIC14.21□□□□□ -0.13
Sox3P53784 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox3P53784 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.21□□□□□ -0.13
Sox3P53784 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sox3P53784 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox3P53784 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Sox3P53784 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox3P53784 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox3P53784 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox3P53784 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox3P53784 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox3P53784 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Sox3P53784 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Sox3P53784 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Gm22065-201ENSMUST00000103753 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm22066-201ENSMUST00000103761 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24932-201ENSMUST00000103763 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24115-201ENSMUST00000103799 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm22190-201ENSMUST00000103827 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm22191-201ENSMUST00000103831 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24721-201ENSMUST00000103849 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm28018-201ENSMUST00000103869 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm26399-201ENSMUST00000103937 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox3P53784 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.2□□□□□ -0.14
Sox3P53784 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox3P53784 Gm25349-201ENSMUST00000177728 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm23616-201ENSMUST00000177797 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm25871-201ENSMUST00000177816 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24752-201ENSMUST00000178240 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24496-201ENSMUST00000178287 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm25649-201ENSMUST00000178476 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm25548-201ENSMUST00000178681 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm23147-201ENSMUST00000178841 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm26095-201ENSMUST00000179270 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm22171-201ENSMUST00000179283 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm23936-201ENSMUST00000179354 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm22619-201ENSMUST00000179516 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm25255-201ENSMUST00000179579 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24755-201ENSMUST00000179691 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm26506-201ENSMUST00000179692 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm25086-201ENSMUST00000179931 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm23243-201ENSMUST00000180047 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24659-201ENSMUST00000180212 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm24169-201ENSMUST00000180244 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm23689-201ENSMUST00000180354 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Gm27359-201ENSMUST00000184153 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm27785-201ENSMUST00000184268 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm27466-201ENSMUST00000184396 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm27703-201ENSMUST00000184836 110 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Gm7774-201ENSMUST00000200064 533 ntBASIC14.2□□□□□ -0.14
Sox3P53784 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.2□□□□□ -0.14
Sox3P53784 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox3P53784 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox3P53784 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox3P53784 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox3P53784 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms