Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lbx1P52955 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lbx1P52955 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lbx1P52955 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lbx1P52955 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.28□□□□□ -0.12
Lbx1P52955 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lbx1P52955 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Gm24514-201ENSMUST00000174961 285 ntBASIC14.28□□□□□ -0.12
Lbx1P52955 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.28□□□□□ -0.12
Lbx1P52955 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.28□□□□□ -0.12
Lbx1P52955 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.28□□□□□ -0.12
Lbx1P52955 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.28□□□□□ -0.12
Lbx1P52955 Gm29787-201ENSMUST00000222129 849 ntBASIC14.28□□□□□ -0.12
Lbx1P52955 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Lbx1P52955 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.28□□□□□ -0.12
Lbx1P52955 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lbx1P52955 Gm5161-201ENSMUST00000075243 853 ntBASIC14.28□□□□□ -0.12
Lbx1P52955 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lbx1P52955 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lbx1P52955 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.27□□□□□ -0.12
Lbx1P52955 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Lbx1P52955 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.27□□□□□ -0.12
Lbx1P52955 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lbx1P52955 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lbx1P52955 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lbx1P52955 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.27□□□□□ -0.13
Lbx1P52955 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.27□□□□□ -0.13
Lbx1P52955 Mir7032-201ENSMUST00000185154 79 ntBASIC14.27□□□□□ -0.13
Lbx1P52955 Gm18307-201ENSMUST00000206864 949 ntBASIC14.27□□□□□ -0.13
Lbx1P52955 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.27□□□□□ -0.13
Lbx1P52955 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lbx1P52955 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lbx1P52955 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.27□□□□□ -0.13
Lbx1P52955 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lbx1P52955 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lbx1P52955 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lbx1P52955 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lbx1P52955 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Gm14263-201ENSMUST00000117955 746 ntBASIC14.26□□□□□ -0.13
Lbx1P52955 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.26□□□□□ -0.13
Lbx1P52955 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Lbx1P52955 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.26□□□□□ -0.13
Lbx1P52955 Gm8099-201ENSMUST00000200510 742 ntBASIC14.26□□□□□ -0.13
Lbx1P52955 Gm40466-201ENSMUST00000212174 422 ntBASIC14.26□□□□□ -0.13
Lbx1P52955 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Lbx1P52955 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms